Keep a brief Layer 4 mention in the ANN guide and remove the dedicated section from the pipeline-output guide. Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
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title, weight, aliases
| title | weight | aliases | |
|---|---|---|---|
| Evaluating Pipeline Output Quality | 7 |
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Evaluating Pipeline Output Quality
| Time: 45 min | Level: Intermediate |
|---|
This tutorial focuses on pipeline output quality: whether the full retrieval pipeline produces the right output once retrieved results reach a consumer, most often an LLM generator in a RAG system.
To measure pipeline output quality, you run your golden set through the full pipeline, capture each (question, retrieved_context, answer) triple, and score the triples against judgment metrics like faithfulness, answer relevancy, and context precision.
This tutorial is part of a four-layer retrieval evaluation framework; see Measuring ANN Precision for the full overview.
Prerequisites. A Qdrant collection populated with your documents as points (vectors + a text payload field for the chunk content), a labeled golden set (see Measuring Retrieval Relevance), LLM access for generation and judging, and Python with ragas installed.
Wiring the RAG Pipeline
Ragas is a Python library that uses an LLM as a judge to score RAG outputs (rating each answer against criteria like faithfulness and relevancy). It expects samples shaped as (question, retrieved_context, answer) triples, so you build a fresh evaluation set from your labeled data. Three steps: prepare the evaluation data, define a grounding prompt, and run the retrieve-generate-record loop.
1. Prepare the evaluation data. Each entry needs a query_id, a query_text (for prompting the generator), a query_vector (for retrieval), and labels. For context_precision only, also include a ground_truth reference answer.
If your queries came from synthetic generation, they don't carry ground-truth answers natively. A simple workaround: make one more LLM pass per query, constrained to the source document, asking for a one-to-two-sentence reference answer. Skip this step if you're only scoring faithfulness and answer_relevancy (both are reference-free).
# Example of an evaluation-ready entry.
{
"query_id": "q1",
"query_text": "how does X work",
"query_vector": [0.12, -0.48, 0.33, ...],
"labels": {"doc_42": 1},
"ground_truth": "...", # optional; required for context_precision only
}
Different golden-set sources (human annotation, log sampling, or LLM synthesis) produce different raw shapes. Normalize to this structure before running the loop.
2. Define the grounding prompt. The prompt is the seam between retrieval and generation. Keep it in a versioned string so you can swap models without touching the evaluation code:
PROMPT_TEMPLATE = """You are answering questions using retrieved source material.
Answer the question below using only the provided context.
If the context does not contain the answer, say so explicitly.
Do not rely on outside knowledge.
Context:
{retrieved_context}
Question:
{query_text}
"""
The prompt above is a starting point; tune it for your domain: answer style, refusal behavior, whether outside knowledge is allowed, and output format.
3. Run retrieval and generation. For each entry, retrieve the top-k chunks, pass them through the generator, and record a SingleTurnSample (Ragas's data class for one evaluation record: question, retrieved context, generated answer, and optional reference).
import os
import anthropic
from qdrant_client import QdrantClient
from ragas import SingleTurnSample
client = QdrantClient("http://localhost:6333") # or QdrantClient(url="https://<id>.cloud.qdrant.io", api_key="...") for Qdrant Cloud
# The example uses Anthropic, but any LLM provider works.
anthropic_client = anthropic.Anthropic(api_key=os.environ.get("ANTHROPIC_API_KEY"))
def generate_answer(query_text: str, contexts: list) -> str:
"""Fill the prompt template with context + question, then call the LLM."""
prompt = PROMPT_TEMPLATE.format(
retrieved_context="\n\n".join(contexts),
query_text=query_text,
)
response = anthropic_client.messages.create(
model=os.environ.get("ANTHROPIC_MODEL", "claude-sonnet-4-6"),
max_tokens=512,
messages=[{"role": "user", "content": prompt}],
)
return response.content[0].text
def build_eval_set(golden_set: list, collection: str, k: int = 10) -> list:
"""For each labeled query: retrieve from Qdrant, generate an answer, package as a Ragas sample."""
samples = []
for entry in golden_set:
# Retrieve top-k chunks from Qdrant.
results = client.query_points(
collection_name=collection,
query=entry["query_vector"],
limit=k,
).points
contexts = [p.payload["text"] for p in results] # adjust the payload key to match your schema
# Generate an answer grounded in those chunks.
answer = generate_answer(entry["query_text"], contexts)
# Package into a Ragas sample: question, context, answer, optional reference.
samples.append(SingleTurnSample(
user_input=entry["query_text"],
retrieved_contexts=contexts,
response=answer,
reference=entry.get("ground_truth", ""),
))
return samples
If an entry's ground_truth is empty, Ragas silently skips that sample for metrics that need a reference (like context_precision). Populate it only when you'll actually score those metrics.
Scoring with Ragas
Three Ragas metrics cover the common failure modes for pipeline output quality:
faithfulnesschecks whether the answer only makes claims supported by the retrieved context. It drops when the generator hallucinates or uses its training knowledge instead of the retrieved context.answer_relevancychecks whether the answer addresses the question. It drops when the generator pads, dodges, or drifts off-topic.context_precisionchecks whether the retrieved chunks are relevant to the ground-truth answer and ranked highly. It drops when retrieval surfaces noise that crowds out the useful chunks.context_precisioncompares against thereferencefield, so it only scores queries that carry a ground-truth answer.
Pass the eval samples into evaluate() with those three metrics:
from ragas import EvaluationDataset, evaluate
from ragas.metrics.collections import faithfulness, answer_relevancy, context_precision
dataset = EvaluationDataset(samples=samples)
scores = evaluate(
dataset,
metrics=[faithfulness, answer_relevancy, context_precision],
# For a non-OpenAI judge, pass llm= and embeddings= (see Ragas docs).
)
evaluate() returns an EvaluationResult object. Its aggregate scores print like this:
{"faithfulness": 0.88, "answer_relevancy": 0.81, "context_precision": 0.74}
Higher is better on all three. Aggregates hide the distribution that tells you what's breaking, so drop into the per-query view to find the worst-scoring samples:
per_query = scores.to_pandas() # row-per-query scores
worst = per_query.nsmallest(10, "faithfulness")
Running in CI
If you ship retrieval changes regularly, this evaluation earns its place in CI. Running it on every change against a fixed golden set catches generator regressions from prompt edits, model swaps, or chunking changes before they reach production. The usual pattern: set a target threshold per metric and fail the job when any score drops below.
Alternatives
Without a golden set. faithfulness and answer_relevancy are reference-free; swap context_precision for LLMContextPrecisionWithoutReference. You can then score synthetic queries offline or sampled production traffic live, at the cost of no fixed baseline for regression gating.
Ragas isn't the only tool in this space: DeepEval has a pytest-native API that fits the CI story more directly.
Isolating Retrieval vs Generation
If you're also running retrieval evaluation against the same golden set, pairing the two scores on every run gives a diagnostic 2x2 for attributing score changes. When a metric drops after a change (new embedding model, new prompt, or new chunking strategy), the pair tells you which half of the pipeline to investigate.
Pair recall@10 from the retrieval evaluation with faithfulness from the pipeline-output evaluation. In the table, High and Low are relative to the target thresholds you set per metric.
| Recall@10 | Faithfulness | Diagnosis |
|---|---|---|
| High | High | Ready to ship. |
| High | Low | Generator or prompt problem. Retrieval is surfacing the right context; something downstream (prompt, model, or temperature) is misusing it. |
| Low | Low | Fix retrieval first. The generator can't be faithful to context it never saw. |
| Low | High | Rare. Usually means either the golden-set labels are incomplete (retrieval found useful docs the label set doesn't cover) or the generator punted with a non-committal answer that has no claims to fail on. Read a sample of per-query outputs before acting. |
This split is the reason to keep retrieval and pipeline-output evaluation separate. Collapsing them into one end-to-end score tells you the pipeline moved, but not which half moved, so the next iteration becomes guesswork.
Non-RAG Use Cases
Ragas's metrics assume the consumer is an LLM generator. If retrieval feeds something else (a ranker, a recommendation surface, an agent, a search UI), swap the metrics to match: CTR or dwell time for a UI, graded rubrics for a ranker, task-completion rate for an agent. The method stays the same: freeze the consumer, run the golden set through the full pipeline, score the end-to-end output. Only the metric changes.
Pitfalls to Watch For
Judge bias. LLM judges reward verbose, confident, or well-formatted answers even when the underlying claim is weaker. Calibrate by running a sample of outputs through human raters and comparing; if judge and human scores disagree often, adjust the rubric or swap the judge model.
Self-judging contamination. Using the same model to generate and to judge inflates scores because the judge recognizes and rewards its own output style. Pick a different model family for the judge than for the generator, and record both versions in every run so score shifts can't be blamed on a silent upgrade.
Cost scaling. LLM-as-judge cost grows with queries times metrics times judge calls per metric, and Ragas makes multiple judge calls per sample. A 500-query golden set with three metrics runs into the thousands of judge-model calls per run. Sample aggressively during iteration and reserve the full sweep for release candidates.
Wrapping Up
That completes the three retrieval-evaluation layers covered in this series: ANN precision, retrieval relevance, and pipeline output quality. Each catches a different class of regression.